Molecular interactions involving nucleic acids represent a elementary paradigm in organic programs, governing processes starting from gene expression to mobile signaling. Quantitative characterization of the thermodynamic and kinetic parameters of those interactions is crucial not just for deciphering molecular mechanisms but in addition for rational design in biomedical engineering and nanomaterials science. This evaluation systematically surveys six main classes of quantitative strategies used to review nucleic acid interactions: spectroscopic strategies, separation-based strategies, calorimetric strategies, surface-based binding assays, single-molecule strategies, and DNA nanotechnology-based strategies. Every class is mentioned with respect to its principal benefits and inherent limitations. Whereas typical strategies reminiscent of electrophoretic mobility shift assays (EMSA), isothermal titration calorimetry (ITC), and spectroscopic titrations have offered foundational insights, they typically exhibit constraints in sensitivity, throughput, or applicability below physiologically related situations. Current advances in DNA nanotechnology, leveraging its inherent programmability and structural precision, have enabled the event of novel quantitative platforms. These embrace DNA origami-based single-molecule strategies and homogeneous assays that help correct and native thermodynamic profiling, considerably enhancing sensitivity and flexibility in physiologically related contexts. This evaluation systematically surveys established methodologies and critically evaluates rising DNA nanotechnology-driven methods, highlighting their potential to advance the quantitative evaluation of nucleic acid interactions.
